Refactor vrs_map to use mavehgvs#1

Merged

sallybg merged 16 commits intodevfrom

bencap/upstream-integration

Jun 14, 2024

Commits on Jun 3, 2024

Commits on Jun 14, 2024

Add mavehgvs parsing for single-position variants
sallybg
committed
Add Samtools to Dockerfile

bencap
authored and
sallybg
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Only run checks on 3.11+

bencap
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sallybg
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Don't close db conn during seqrepo check
sallybg
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Refactor vrs_map to use mavehgvs

sallybg
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bencap
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Remove tests for variants with '?' character in hgvs string

sallybg
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bencap
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nb: add experiment data

jsstevenson
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sallybg
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nb: update figure params

jsstevenson
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sallybg
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Handle NoneType variant sequences

sallybg
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bencap
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Output all mappings unless preferred layer is specified

sallybg
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bencap
committed