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@RajLabMSSM

RajLabMSSM

The Raj Lab investigates neurodegenerative disorders through the application of computational methods to multi-omics data

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  1. echolocatoR echolocatoR Public

    Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.

    R 46 14

  2. ggLocusZoom ggLocusZoom Public archive

    Create LocusZoom-style plots in R.

    R 22 4

  3. catalogueR catalogueR Public

    Easy-to-use R wrappers for the eQTL Catalogue's API (both with tabix and the REST API).

    R 14 2

  4. Fine_Mapping Fine_Mapping Public

    Fine mapping of genes associated with Parkinson's Disease using a variety of methods

    HTML 11 4

  5. downstream-QTL downstream-QTL Public

    set of scripts and pipelines to work with QTL results

    HTML 10 2

  6. isoseq-pipeline isoseq-pipeline Public

    pipeline for working with PacBio long read RNA data using the outputs of isoseq3

    Python 9 4

Repositories

Showing 10 of 63 repositories
  • downstream-QTL Public

    set of scripts and pipelines to work with QTL results

    RajLabMSSM/downstream-QTL’s past year of commit activity
    HTML 10 2 7 2 Updated Mar 31, 2026
  • AD_MPRA Public

    AD Fine-mapping and MPRA

    RajLabMSSM/AD_MPRA’s past year of commit activity
    HTML 1 1 0 0 Updated Mar 21, 2026
  • SingleBrain Public
    RajLabMSSM/SingleBrain’s past year of commit activity
    R 7 0 0 0 Updated Mar 21, 2026
  • echolocatoR Public

    Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.

    RajLabMSSM/echolocatoR’s past year of commit activity
    R 46 MIT 14 10 0 Updated Mar 16, 2026
  • echoannot Public

    echoverse module: Annotate fine-mapping results

    RajLabMSSM/echoannot’s past year of commit activity
    R 2 0 0 0 Updated Mar 16, 2026
  • echotabix Public

    echoverse module: Tabix indexing and querying.

    RajLabMSSM/echotabix’s past year of commit activity
    R 0 0 0 0 Updated Mar 16, 2026
  • echoLD Public

    echoverse module: LD downloading and processing

    RajLabMSSM/echoLD’s past year of commit activity
    R 1 0 0 0 Updated Mar 16, 2026
  • echoconda Public

    echoverse module: conda environment handling

    RajLabMSSM/echoconda’s past year of commit activity
    R 1 3 0 0 Updated Mar 16, 2026
  • catalogueR Public

    Easy-to-use R wrappers for the eQTL Catalogue's API (both with tabix and the REST API).

    RajLabMSSM/catalogueR’s past year of commit activity
    R 14 MIT 2 0 0 Updated Mar 16, 2026
  • echoAI Public

    Echoverse Module: AI/ML Variant-Level Predictions

    RajLabMSSM/echoAI’s past year of commit activity
    R 0 0 0 0 Updated Mar 16, 2026
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